Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PKP3Q9Y446 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PKP3Q9Y446 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PKP3Q9Y446 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
PKP3Q9Y446 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PKP3Q9Y446 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PKP3Q9Y446 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 MIR1199-201ENST00000621445 119 ntBASIC17.15■□□□□ 0.34
PKP3Q9Y446 AC008735.5-201ENST00000623544 497 ntBASIC17.15■□□□□ 0.34
PKP3Q9Y446 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP3Q9Y446 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP3Q9Y446 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PKP3Q9Y446 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PKP3Q9Y446 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.14■□□□□ 0.34
PKP3Q9Y446 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 AC092053.1-201ENST00000605787 1936 ntBASIC17.14■□□□□ 0.33
PKP3Q9Y446 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 AL662844.1-201ENST00000546340 181 ntBASIC17.14■□□□□ 0.33
PKP3Q9Y446 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP3Q9Y446 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PKP3Q9Y446 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 ELK2BP-201ENST00000415014 1224 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 HNRNPDP1-201ENST00000439535 754 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms