Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 AC007950.2-201ENST00000615045 2347 ntBASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AC092364.2-201ENST00000596710 2692 ntBASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AL391256.1-201ENST00000443260 1855 ntBASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AL135999.2-201ENST00000622438 1686 ntBASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 LIN28AP1-201ENST00000429574 405 ntBASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D4Q9Y2X8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 TUBB8P12-201ENST00000308911 1335 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 TUBB7P-202ENST00000428444 1305 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 TUBB8P7-204ENST00000567960 1332 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 SLC25A3P1-201ENST00000443844 931 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 ATP5G1P1-201ENST00000448724 379 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 AC145285.6-201ENST00000604632 637 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms