Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 AC023274.1-201ENST00000418278 595 ntBASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ACTL9-202ENST00000612068 1252 ntBASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 REXO1L3P-201ENST00000622202 1288 ntBASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 AP001094.4-201ENST00000579008 2176 ntBASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.42■□□□□ 0.22
SPHK1Q9NYA1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 FAM185BP-201ENST00000443595 716 ntBASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 CXCL1P1-201ENST00000502804 216 ntBASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 AC092865.6-201ENST00000642101 219 ntBASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 AC060834.1-201ENST00000443027 2032 ntBASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPHK1Q9NYA1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AC096734.2-201ENST00000562054 433 ntBASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AL513190.1-201ENST00000621254 727 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms