Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AC105339.3-201ENST00000560043 636 ntBASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AL139424.1-201ENST00000607572 797 ntBASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AC004706.3-202ENST00000621574 984 ntBASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AC008735.5-201ENST00000623544 497 ntBASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 AL353135.1-201ENST00000606729 504 ntBASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PARPBPQ9NWS1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 GPR89P-201ENST00000407924 1495 ntBASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 AC009078.2-202ENST00000463353 338 ntBASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 AL023806.1-201ENST00000603994 1649 ntBASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 FAM215A-202ENST00000632077 792 ntBASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms