Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AC104692.2-201ENST00000603054 253 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AC008735.5-201ENST00000623544 497 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AL805961.1-202ENST00000641562 540 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AF228730.7-201ENST00000641842 219 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 AL021920.2-201ENST00000624828 1351 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBQLN4Q9NRR5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 AC006504.4-201ENST00000592118 1568 ntBASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 KRT18P27-201ENST00000427733 1299 ntBASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 AC136632.2-201ENST00000512891 861 ntBASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 AP002469.2-201ENST00000531724 424 ntBASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 AC105339.3-201ENST00000560043 636 ntBASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 MIR1199-201ENST00000621445 119 ntBASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBQLN4Q9NRR5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ELK2BP-201ENST00000415014 1224 ntBASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 HNRNPDP1-201ENST00000439535 754 ntBASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 AL773604.1-201ENST00000617417 272 ntBASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 PGM5P2-202ENST00000637225 1043 ntBASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBQLN4Q9NRR5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms