Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 AC016396.2-201ENST00000562575 1417 ntBASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 RPL37AP1-201ENST00000412502 279 ntBASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP4Q9C0A0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 AL080243.2-201ENST00000418783 582 ntBASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 ZNF890P-202ENST00000530367 1156 ntBASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP4Q9C0A0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 AL353779.1-201ENST00000434793 351 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 RN7SL828P-201ENST00000607615 303 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 AL589739.1-201ENST00000607720 493 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
CNTNAP4Q9C0A0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms