Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CPNE1Q99829 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CPNE1Q99829 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.08■□□□□ 0.33
CPNE1Q99829 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.08■□□□□ 0.33
CPNE1Q99829 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE1Q99829 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPNE1Q99829 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE1Q99829 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CPNE1Q99829 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPNE1Q99829 POM121L3P-201ENST00000419331 1163 ntBASIC17.08■□□□□ 0.32
CPNE1Q99829 PCED1CP-201ENST00000419887 785 ntBASIC17.08■□□□□ 0.32
CPNE1Q99829 LINC00265-3P-201ENST00000447588 903 ntBASIC17.08■□□□□ 0.32
CPNE1Q99829 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPNE1Q99829 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
CPNE1Q99829 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE1Q99829 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.08■□□□□ 0.32
CPNE1Q99829 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE1Q99829 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE1Q99829 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.08■□□□□ 0.32
CPNE1Q99829 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPNE1Q99829 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE1Q99829 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPNE1Q99829 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE1Q99829 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 SIGLEC16-201ENST00000599858 1437 ntBASIC17.07■□□□□ 0.32
CPNE1Q99829 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE1Q99829 DUX4L17-201ENST00000557360 1267 ntBASIC17.07■□□□□ 0.32
CPNE1Q99829 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.07■□□□□ 0.32
CPNE1Q99829 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE1Q99829 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE1Q99829 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CPNE1Q99829 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 AL391256.1-201ENST00000443260 1855 ntBASIC17.07■□□□□ 0.32
CPNE1Q99829 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE1Q99829 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE1Q99829 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE1Q99829 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CPNE1Q99829 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE1Q99829 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 AC097637.2-201ENST00000624096 1997 ntBASIC17.06■□□□□ 0.32
CPNE1Q99829 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE1Q99829 AL021920.2-201ENST00000624828 1351 ntBASIC17.06■□□□□ 0.32
CPNE1Q99829 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CPNE1Q99829 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CPNE1Q99829 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 KRT18P21-201ENST00000515767 1272 ntBASIC17.06■□□□□ 0.32
CPNE1Q99829 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.06■□□□□ 0.32
CPNE1Q99829 AC074051.2-201ENST00000565115 352 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms