Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC22.34■■□□□ 1.17
ABCA3Q99758 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC22.34■■□□□ 1.17
ABCA3Q99758 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.34■■□□□ 1.17
ABCA3Q99758 AL512343.1-201ENST00000605837 169 ntBASIC22.34■■□□□ 1.17
ABCA3Q99758 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCA3Q99758 REXO1L6P-201ENST00000603433 1515 ntBASIC22.33■■□□□ 1.17
ABCA3Q99758 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.33■■□□□ 1.17
ABCA3Q99758 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.33■■□□□ 1.17
ABCA3Q99758 SLC25A6P5-201ENST00000435663 894 ntBASIC22.33■■□□□ 1.17
ABCA3Q99758 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCA3Q99758 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 AC092552.1-201ENST00000547243 906 ntBASIC22.33■■□□□ 1.17
ABCA3Q99758 MPDU1-223ENST00000582151 728 ntBASIC22.33■■□□□ 1.17
ABCA3Q99758 CTBP2P3-201ENST00000585629 1255 ntBASIC22.33■■□□□ 1.17
ABCA3Q99758 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
ABCA3Q99758 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCA3Q99758 WNT11-204ENST00000621122 789 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCA3Q99758 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.33■■□□□ 1.17
ABCA3Q99758 COX11-210ENST00000639671 696 ntBASIC22.33■■□□□ 1.17
ABCA3Q99758 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCA3Q99758 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ABCA3Q99758 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ABCA3Q99758 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.16
ABCA3Q99758 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC22.33■■□□□ 1.16
ABCA3Q99758 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
ABCA3Q99758 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.33■■□□□ 1.16
ABCA3Q99758 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCA3Q99758 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ABCA3Q99758 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC22.32■■□□□ 1.16
ABCA3Q99758 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC22.32■■□□□ 1.16
ABCA3Q99758 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 CD81-207ENST00000481687 890 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCA3Q99758 PACS1-203ENST00000524815 628 ntTSL 4 BASIC22.32■■□□□ 1.16
ABCA3Q99758 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC22.32■■□□□ 1.16
ABCA3Q99758 AP005482.1-201ENST00000563722 1273 ntBASIC22.32■■□□□ 1.16
ABCA3Q99758 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
ABCA3Q99758 SRD5A3P1-201ENST00000603021 949 ntBASIC22.32■■□□□ 1.16
ABCA3Q99758 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.32■■□□□ 1.16
ABCA3Q99758 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCA3Q99758 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC22.31■■□□□ 1.16
ABCA3Q99758 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC22.31■■□□□ 1.16
ABCA3Q99758 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC22.31■■□□□ 1.16
ABCA3Q99758 AC007389.4-201ENST00000454674 793 ntBASIC22.31■■□□□ 1.16
ABCA3Q99758 BNIP3P42-201ENST00000454982 569 ntBASIC22.31■■□□□ 1.16
ABCA3Q99758 TPRX2P-201ENST00000535362 881 ntBASIC22.31■■□□□ 1.16
ABCA3Q99758 BNIP3P29-201ENST00000598302 571 ntBASIC22.31■■□□□ 1.16
ABCA3Q99758 AC011447.5-201ENST00000616168 564 ntBASIC22.31■■□□□ 1.16
ABCA3Q99758 AL109936.8-201ENST00000641772 604 ntBASIC22.31■■□□□ 1.16
ABCA3Q99758 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.31■■□□□ 1.16
ABCA3Q99758 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.31■■□□□ 1.16
ABCA3Q99758 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.31■■□□□ 1.16
ABCA3Q99758 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.31■■□□□ 1.16
ABCA3Q99758 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCA3Q99758 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
ABCA3Q99758 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCA3Q99758 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCA3Q99758 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ABCA3Q99758 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC22.3■■□□□ 1.16
ABCA3Q99758 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.3■■□□□ 1.16
ABCA3Q99758 AC087499.6-201ENST00000411576 835 ntBASIC22.3■■□□□ 1.16
ABCA3Q99758 AC011495.1-201ENST00000498085 584 ntBASIC22.3■■□□□ 1.16
ABCA3Q99758 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
ABCA3Q99758 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
ABCA3Q99758 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC22.3■■□□□ 1.16
ABCA3Q99758 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCA3Q99758 AL355312.1-201ENST00000407115 2176 ntBASIC22.3■■□□□ 1.16
ABCA3Q99758 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCA3Q99758 IMPDH1P4-201ENST00000445028 1534 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms