Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 AL023806.1-201ENST00000603994 1649 ntBASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 LINC01225-203ENST00000563550 1244 ntBASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNB3Q8WWL7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 SLC22A20-204ENST00000530038 1673 ntBASIC26.05■■□□□ 1.76
CCNB3Q8WWL7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 HCG4-201ENST00000418983 998 ntBASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 AC069262.1-201ENST00000539058 672 ntBASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 AC084121.4-201ENST00000641598 221 ntBASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 AF228730.8-201ENST00000642140 221 ntBASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCNB3Q8WWL7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 SPDYE14P-201ENST00000442619 822 ntBASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 AC093214.1-201ENST00000511688 1107 ntBASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 AC124947.2-201ENST00000547118 1133 ntBASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 AJ011932.1-201ENST00000621707 465 ntBASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 AC108860.2-201ENST00000562760 2183 ntBASIC26.03■■□□□ 1.76
CCNB3Q8WWL7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
CCNB3Q8WWL7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms