Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AL135744.1-201ENST00000565098 629 ntBASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 RNF216P1-203ENST00000404404 2427 ntBASIC17.12■□□□□ 0.33
CHD5Q8TDI0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD5Q8TDI0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 TOP3BP1-201ENST00000420768 1380 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 KRT18P13-201ENST00000400056 1290 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 MIR940-201ENST00000401276 94 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 C20orf181-201ENST00000623918 480 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AL671710.1-201ENST00000610245 2349 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 DNAJB3-201ENST00000446806 729 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AC091812.2-201ENST00000619081 385 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 AC006277.1-201ENST00000624348 1610 ntBASIC17.11■□□□□ 0.33
CHD5Q8TDI0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD5Q8TDI0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 ELL2P1-201ENST00000413990 1906 ntBASIC17.1■□□□□ 0.33
CHD5Q8TDI0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms