Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 UXT-AS1-201ENST00000590504 1525 ntBASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 MIR4515-201ENST00000584082 81 ntBASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 MIR6080-201ENST00000617359 66 ntBASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNIP1Q8TAD8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 AC009949.1-201ENST00000623048 1830 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 PKD1P5-201ENST00000532415 10291 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 AC092580.3-201ENST00000430932 139 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 AC241585.1-201ENST00000433527 519 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ATP5G2P4-201ENST00000442175 420 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 AC004890.2-204ENST00000481968 304 ntBASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.06■□□□□ 0.16
SNIP1Q8TAD8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms