Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 BCAR1-209ENST00000546196 1340 ntBASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 AC002347.1-201ENST00000569543 541 ntBASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 AC005412.3-201ENST00000580309 715 ntBASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 AC023141.13-201ENST00000604991 943 ntBASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF39Q8N4T4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 AC020916.1-201ENST00000587762 1774 ntBASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 BX842568.4-201ENST00000421222 227 ntBASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 AC091167.2-201ENST00000579581 588 ntBASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 MIR4492-201ENST00000581627 80 ntBASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 MPDU1-223ENST00000582151 728 ntBASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF39Q8N4T4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 AL353732.1-201ENST00000569618 1459 ntBASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 AL513480.1-201ENST00000451731 511 ntBASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 AC007064.4-201ENST00000637740 555 ntBASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
ARHGEF39Q8N4T4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms