Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 AC002558.1-201ENST00000488906 803 ntBASIC18.55■□□□□ 0.56
VPS52Q8N1B4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 KRT19P2-202ENST00000557173 1012 ntBASIC18.55■□□□□ 0.56
VPS52Q8N1B4 OR7E47P-204ENST00000575924 449 ntBASIC18.55■□□□□ 0.56
VPS52Q8N1B4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 LINC00896-202ENST00000609602 2128 ntBASIC18.55■□□□□ 0.56
VPS52Q8N1B4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS52Q8N1B4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 MYCLP1-201ENST00000372451 1075 ntBASIC18.54■□□□□ 0.56
VPS52Q8N1B4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 KRT18P55-202ENST00000578578 1546 ntBASIC18.54■□□□□ 0.56
VPS52Q8N1B4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS52Q8N1B4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 RHOQP3-201ENST00000437982 621 ntBASIC18.53■□□□□ 0.56
VPS52Q8N1B4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 RFPL4AP1-201ENST00000530883 850 ntBASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AL031432.2-201ENST00000566714 459 ntBASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AL928711.1-201ENST00000570165 459 ntBASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AC025580.3-201ENST00000617932 1424 ntBASIC18.53■□□□□ 0.56
VPS52Q8N1B4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS52Q8N1B4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 PI4KAP1-204ENST00000612579 1703 ntBASIC18.52■□□□□ 0.56
VPS52Q8N1B4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 OR6D1P-203ENST00000641209 4860 ntBASIC18.52■□□□□ 0.56
VPS52Q8N1B4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 CYMP-203ENST00000474680 1263 ntBASIC18.52■□□□□ 0.56
VPS52Q8N1B4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 AP002472.1-201ENST00000577490 586 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms