Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 CR383656.12-201ENST00000549567 513 ntBASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AC009407.1-201ENST00000568958 598 ntBASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AC140912.1-201ENST00000577171 1054 ntBASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 CU639417.3-201ENST00000624240 1404 ntBASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL27A1Q8IZC6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.83■□□□□ 0.13
COL27A1Q8IZC6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL27A1Q8IZC6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.83■□□□□ 0.13
COL27A1Q8IZC6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL27A1Q8IZC6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.83■□□□□ 0.13
COL27A1Q8IZC6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 GK-202ENST00000378941 458 ntTSL 3 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 RPL37AP1-201ENST00000412502 279 ntBASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 HLA-V-204ENST00000476601 1289 ntBASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 AC104794.3-201ENST00000566840 1248 ntBASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 AL358472.5-202ENST00000641448 1267 ntBASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL27A1Q8IZC6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 NME2P1-201ENST00000426182 414 ntBASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.82■□□□□ 0.12
COL27A1Q8IZC6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 CETN4P-206ENST00000642099 2168 ntBASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms