Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RCN1P1-201ENST00000400413 996 ntBASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC246785.2-201ENST00000432512 513 ntBASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 BX276092.5-203ENST00000456199 560 ntBASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC019129.2-201ENST00000609837 1235 ntBASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 LINC02012-201ENST00000608206 1725 ntBASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
MRPL55Q7Z7F7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms