Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.98■□□□□ 0.95
SCN7AQ01118 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.98■□□□□ 0.95
SCN7AQ01118 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.98■□□□□ 0.95
SCN7AQ01118 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.98■□□□□ 0.95
SCN7AQ01118 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.98■□□□□ 0.95
SCN7AQ01118 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCN7AQ01118 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SCN7AQ01118 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCN7AQ01118 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCN7AQ01118 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN7AQ01118 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN7AQ01118 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 GK-202ENST00000378941 458 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN7AQ01118 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SCN7AQ01118 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SCN7AQ01118 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN7AQ01118 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN7AQ01118 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN7AQ01118 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN7AQ01118 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.97■□□□□ 0.95
SCN7AQ01118 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
SCN7AQ01118 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN7AQ01118 AL133215.2-201ENST00000609242 977 ntBASIC20.97■□□□□ 0.95
SCN7AQ01118 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN7AQ01118 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN7AQ01118 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCN7AQ01118 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN7AQ01118 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN7AQ01118 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN7AQ01118 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SCN7AQ01118 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN7AQ01118 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN7AQ01118 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 AC004233.3-201ENST00000607794 1269 ntBASIC20.96■□□□□ 0.95
SCN7AQ01118 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN7AQ01118 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN7AQ01118 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN7AQ01118 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN7AQ01118 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN7AQ01118 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN7AQ01118 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.96■□□□□ 0.95
SCN7AQ01118 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN7AQ01118 NOC2LP1-202ENST00000452600 2235 ntBASIC20.95■□□□□ 0.94
SCN7AQ01118 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 CU639417.3-201ENST00000624240 1404 ntBASIC20.95■□□□□ 0.94
SCN7AQ01118 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
SCN7AQ01118 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN7AQ01118 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN7AQ01118 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN7AQ01118 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.95■□□□□ 0.94
SCN7AQ01118 U91328.1-201ENST00000437528 223 ntBASIC20.95■□□□□ 0.94
SCN7AQ01118 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 AC027307.3-201ENST00000594262 1100 ntBASIC20.95■□□□□ 0.94
SCN7AQ01118 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN7AQ01118 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN7AQ01118 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN7AQ01118 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN7AQ01118 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN7AQ01118 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN7AQ01118 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN7AQ01118 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN7AQ01118 SPDYE18-201ENST00000510091 1050 ntBASIC20.94■□□□□ 0.94
SCN7AQ01118 RNA5SP410-201ENST00000516285 106 ntBASIC20.94■□□□□ 0.94
SCN7AQ01118 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN7AQ01118 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN7AQ01118 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.94■□□□□ 0.94
SCN7AQ01118 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.94■□□□□ 0.94
SCN7AQ01118 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SCN7AQ01118 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms