Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CBX1P83916 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CBX1P83916 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.87■□□□□ 0.45
CBX1P83916 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.87■□□□□ 0.45
CBX1P83916 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CBX1P83916 AC005181.1-201ENST00000604782 1256 ntBASIC17.87■□□□□ 0.45
CBX1P83916 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CBX1P83916 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 AC068338.2-201ENST00000563278 1430 ntBASIC17.87■□□□□ 0.45
CBX1P83916 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CBX1P83916 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CBX1P83916 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 AC005252.3-201ENST00000623855 2258 ntBASIC17.87■□□□□ 0.45
CBX1P83916 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CBX1P83916 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 MIR564-202ENST00000385049 94 ntBASIC17.86■□□□□ 0.45
CBX1P83916 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.86■□□□□ 0.45
CBX1P83916 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.86■□□□□ 0.45
CBX1P83916 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.86■□□□□ 0.45
CBX1P83916 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CBX1P83916 AC041040.2-201ENST00000622926 2899 ntBASIC17.86■□□□□ 0.45
CBX1P83916 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 KRT17P1-201ENST00000399211 1546 ntBASIC17.86■□□□□ 0.45
CBX1P83916 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CBX1P83916 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CBX1P83916 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CBX1P83916 AC006486.2-201ENST00000624246 2199 ntBASIC17.86■□□□□ 0.45
CBX1P83916 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.86■□□□□ 0.45
CBX1P83916 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX1P83916 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
CBX1P83916 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CBX1P83916 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CBX1P83916 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CBX1P83916 AC073210.2-201ENST00000430369 194 ntBASIC17.85■□□□□ 0.45
CBX1P83916 AL122018.1-201ENST00000446607 2310 ntBASIC17.85■□□□□ 0.45
CBX1P83916 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.85■□□□□ 0.45
CBX1P83916 AC005837.3-201ENST00000612163 286 ntBASIC17.85■□□□□ 0.45
CBX1P83916 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CBX1P83916 AL121906.2-201ENST00000621597 723 ntBASIC17.85■□□□□ 0.45
CBX1P83916 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CBX1P83916 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX1P83916 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CBX1P83916 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CBX1P83916 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CBX1P83916 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.85■□□□□ 0.45
CBX1P83916 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.85■□□□□ 0.45
CBX1P83916 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 AL391256.1-201ENST00000443260 1855 ntBASIC17.84■□□□□ 0.45
CBX1P83916 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms