Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.82■□□□□ 0.44
IRX4P78413 MTCL1P1-201ENST00000446207 792 ntBASIC17.82■□□□□ 0.44
IRX4P78413 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.82■□□□□ 0.44
IRX4P78413 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.82■□□□□ 0.44
IRX4P78413 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
IRX4P78413 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 AC134684.3-201ENST00000641758 218 ntBASIC17.82■□□□□ 0.44
IRX4P78413 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX4P78413 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
IRX4P78413 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
IRX4P78413 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
IRX4P78413 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX4P78413 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
IRX4P78413 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX4P78413 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.81■□□□□ 0.44
IRX4P78413 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
IRX4P78413 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.81■□□□□ 0.44
IRX4P78413 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX4P78413 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.81■□□□□ 0.44
IRX4P78413 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 AC025062.2-201ENST00000605477 670 ntBASIC17.81■□□□□ 0.44
IRX4P78413 AC008735.5-201ENST00000623544 497 ntBASIC17.81■□□□□ 0.44
IRX4P78413 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX4P78413 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX4P78413 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX4P78413 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
IRX4P78413 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX4P78413 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
IRX4P78413 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX4P78413 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX4P78413 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.8■□□□□ 0.44
IRX4P78413 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
IRX4P78413 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IRX4P78413 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.8■□□□□ 0.44
IRX4P78413 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX4P78413 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX4P78413 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 AC125634.1-201ENST00000438758 1403 ntBASIC17.8■□□□□ 0.44
IRX4P78413 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
IRX4P78413 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms