Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 AC026396.1-201ENST00000419388 421 ntBASIC13.38□□□□□ -0.27
RAB5BP61020 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB5BP61020 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 C2orf69P4-201ENST00000565394 541 ntBASIC13.38□□□□□ -0.27
RAB5BP61020 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.38□□□□□ -0.27
RAB5BP61020 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.38□□□□□ -0.27
RAB5BP61020 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 LINC02012-201ENST00000608206 1725 ntBASIC13.38□□□□□ -0.27
RAB5BP61020 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB5BP61020 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RAB5BP61020 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB5BP61020 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB5BP61020 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB5BP61020 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RAB5BP61020 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB5BP61020 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB5BP61020 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 TSPY23P-201ENST00000440136 739 ntBASIC13.37□□□□□ -0.27
RAB5BP61020 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.37□□□□□ -0.27
RAB5BP61020 PBX2P1-201ENST00000493219 1291 ntBASIC13.37□□□□□ -0.27
RAB5BP61020 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB5BP61020 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB5BP61020 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB5BP61020 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB5BP61020 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB5BP61020 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RAB5BP61020 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB5BP61020 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
RAB5BP61020 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RAB5BP61020 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB5BP61020 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms