Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN20P56880 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 RPS2P1-201ENST00000434010 821 ntBASIC15.71■□□□□ 0.11
CLDN20P56880 AC079776.4-201ENST00000511039 504 ntBASIC15.71■□□□□ 0.11
CLDN20P56880 RNA5SP419-201ENST00000515908 135 ntBASIC15.71■□□□□ 0.11
CLDN20P56880 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.71■□□□□ 0.11
CLDN20P56880 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN20P56880 AL022326.1-202ENST00000641533 845 ntBASIC15.71■□□□□ 0.11
CLDN20P56880 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CLDN20P56880 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN20P56880 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN20P56880 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN20P56880 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN20P56880 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.1
CLDN20P56880 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CLDN20P56880 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN20P56880 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN20P56880 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN20P56880 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN20P56880 PCDHA14-201ENST00000506751 2298 ntBASIC15.7■□□□□ 0.1
CLDN20P56880 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 PCDHA1-201ENST00000378133 2726 ntBASIC15.7■□□□□ 0.1
CLDN20P56880 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDN20P56880 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN20P56880 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN20P56880 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 AL031284.1-201ENST00000419297 478 ntBASIC15.7■□□□□ 0.1
CLDN20P56880 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN20P56880 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CLDN20P56880 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN20P56880 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN20P56880 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN20P56880 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN20P56880 AGGF1P2-201ENST00000426656 2106 ntBASIC15.7■□□□□ 0.1
CLDN20P56880 AC133963.1-201ENST00000504166 1679 ntBASIC15.7■□□□□ 0.1
CLDN20P56880 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN20P56880 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 AC103702.1-201ENST00000548801 2630 ntBASIC15.69■□□□□ 0.1
CLDN20P56880 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN20P56880 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN20P56880 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 PRYP5-201ENST00000451909 266 ntBASIC15.69■□□□□ 0.1
CLDN20P56880 SIGLEC30P-201ENST00000455569 941 ntBASIC15.69■□□□□ 0.1
CLDN20P56880 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN20P56880 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms