Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.67■□□□□ 0.42
COPAP53621 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPAP53621 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.67■□□□□ 0.42
COPAP53621 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
COPAP53621 AL121761.2-201ENST00000598007 1648 ntBASIC17.67■□□□□ 0.42
COPAP53621 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPAP53621 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COPAP53621 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPAP53621 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPAP53621 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COPAP53621 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COPAP53621 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.66■□□□□ 0.42
COPAP53621 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.66■□□□□ 0.42
COPAP53621 NCF1C-201ENST00000438382 1427 ntBASIC17.66■□□□□ 0.42
COPAP53621 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
COPAP53621 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COPAP53621 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.66■□□□□ 0.42
COPAP53621 GPX1P2-201ENST00000429271 606 ntBASIC17.66■□□□□ 0.42
COPAP53621 SIGLEC30P-201ENST00000455569 941 ntBASIC17.66■□□□□ 0.42
COPAP53621 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.66■□□□□ 0.42
COPAP53621 STK25P1-201ENST00000585406 838 ntBASIC17.66■□□□□ 0.42
COPAP53621 AC010327.4-202ENST00000591484 748 ntBASIC17.66■□□□□ 0.42
COPAP53621 AC064836.3-201ENST00000607928 673 ntBASIC17.66■□□□□ 0.42
COPAP53621 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.66■□□□□ 0.42
COPAP53621 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.66■□□□□ 0.42
COPAP53621 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 KRT18P55-202ENST00000578578 1546 ntBASIC17.66■□□□□ 0.42
COPAP53621 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPAP53621 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COPAP53621 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
COPAP53621 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
COPAP53621 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
COPAP53621 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.65■□□□□ 0.42
COPAP53621 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
COPAP53621 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.65■□□□□ 0.42
COPAP53621 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.65■□□□□ 0.42
COPAP53621 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.65■□□□□ 0.42
COPAP53621 AC092183.1-201ENST00000469884 875 ntBASIC17.65■□□□□ 0.42
COPAP53621 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.65■□□□□ 0.42
COPAP53621 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.65■□□□□ 0.42
COPAP53621 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.65■□□□□ 0.42
COPAP53621 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.65■□□□□ 0.42
COPAP53621 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.65■□□□□ 0.42
COPAP53621 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.65■□□□□ 0.42
COPAP53621 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPAP53621 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
COPAP53621 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
COPAP53621 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPAP53621 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 AL118508.1-201ENST00000613502 2345 ntBASIC17.64■□□□□ 0.41
COPAP53621 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COPAP53621 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.64■□□□□ 0.41
COPAP53621 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.64■□□□□ 0.41
COPAP53621 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.64■□□□□ 0.41
COPAP53621 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.64■□□□□ 0.41
COPAP53621 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.64■□□□□ 0.41
COPAP53621 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
COPAP53621 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms