Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC30.07■■■□□ 2.4
SMARCA4P51532 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCA4P51532 RBM39-205ENST00000397370 612 ntTSL 2 BASIC30.07■■■□□ 2.4
SMARCA4P51532 AC114501.2-201ENST00000439631 535 ntBASIC30.07■■■□□ 2.4
SMARCA4P51532 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC30.07■■■□□ 2.4
SMARCA4P51532 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC30.07■■■□□ 2.4
SMARCA4P51532 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
SMARCA4P51532 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
SMARCA4P51532 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC30.06■■■□□ 2.4
SMARCA4P51532 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SMARCA4P51532 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC30.06■■■□□ 2.4
SMARCA4P51532 RN7SL618P-201ENST00000477850 296 ntBASIC30.06■■■□□ 2.4
SMARCA4P51532 GLI4-203ENST00000517468 963 ntTSL 5 BASIC30.06■■■□□ 2.4
SMARCA4P51532 QPRT-203ENST00000562473 579 ntTSL 3 BASIC30.06■■■□□ 2.4
SMARCA4P51532 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SMARCA4P51532 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC30.06■■■□□ 2.4
SMARCA4P51532 SPTSSB-204ENST00000617024 1292 ntBASIC30.06■■■□□ 2.4
SMARCA4P51532 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC30.06■■■□□ 2.4
SMARCA4P51532 AC093525.9-201ENST00000624961 1746 ntBASIC30.06■■■□□ 2.4
SMARCA4P51532 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
SMARCA4P51532 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCA4P51532 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
SMARCA4P51532 SPDYE19P-201ENST00000338590 713 ntBASIC30.05■■■□□ 2.4
SMARCA4P51532 MIR658-201ENST00000385210 100 ntBASIC30.05■■■□□ 2.4
SMARCA4P51532 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC30.05■■■□□ 2.4
SMARCA4P51532 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SMARCA4P51532 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA4P51532 AC009113.1-201ENST00000570267 2443 ntBASIC30.04■■■□□ 2.4
SMARCA4P51532 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA4P51532 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC30.04■■■□□ 2.4
SMARCA4P51532 TTTY23B-201ENST00000442790 549 ntBASIC30.04■■■□□ 2.4
SMARCA4P51532 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC30.04■■■□□ 2.4
SMARCA4P51532 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC30.04■■■□□ 2.4
SMARCA4P51532 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA4P51532 ABALON-201ENST00000629058 1903 ntBASIC30.04■■■□□ 2.4
SMARCA4P51532 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 AL023806.1-201ENST00000603994 1649 ntBASIC30.04■■■□□ 2.4
SMARCA4P51532 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC30.04■■■□□ 2.4
SMARCA4P51532 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA4P51532 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC30.04■■■□□ 2.4
SMARCA4P51532 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA4P51532 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC30.04■■■□□ 2.4
SMARCA4P51532 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA4P51532 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA4P51532 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA4P51532 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
SMARCA4P51532 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC30.03■■■□□ 2.4
SMARCA4P51532 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCA4P51532 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA4P51532 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC30.03■■■□□ 2.4
SMARCA4P51532 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA4P51532 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC30.03■■■□□ 2.4
SMARCA4P51532 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC30.03■■■□□ 2.4
SMARCA4P51532 KRT17P8-201ENST00000540749 863 ntBASIC30.03■■■□□ 2.4
SMARCA4P51532 AC099568.2-201ENST00000609194 695 ntBASIC30.03■■■□□ 2.4
SMARCA4P51532 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC30.03■■■□□ 2.4
SMARCA4P51532 AL021920.2-201ENST00000624828 1351 ntBASIC30.03■■■□□ 2.4
SMARCA4P51532 AC108860.2-201ENST00000562760 2183 ntBASIC30.03■■■□□ 2.4
SMARCA4P51532 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA4P51532 AC012317.2-201ENST00000623305 2251 ntBASIC30.02■■■□□ 2.4
SMARCA4P51532 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA4P51532 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA4P51532 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA4P51532 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC30.02■■■□□ 2.4
SMARCA4P51532 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 RAB35-202ENST00000534951 939 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 NAA38-206ENST00000576384 424 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC30.02■■■□□ 2.4
SMARCA4P51532 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA4P51532 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA4P51532 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA4P51532 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA4P51532 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA4P51532 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC30.01■■■□□ 2.39
SMARCA4P51532 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA4P51532 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
SMARCA4P51532 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC30.01■■■□□ 2.39
SMARCA4P51532 AC044860.1-202ENST00000559481 777 ntBASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms