Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MMP13P45452 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP13P45452 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.79■□□□□ 0.44
MMP13P45452 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MMP13P45452 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 AC046185.3-201ENST00000623228 1824 ntBASIC17.79■□□□□ 0.44
MMP13P45452 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.79■□□□□ 0.44
MMP13P45452 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 PKD1P1-201ENST00000458669 6805 ntBASIC17.79■□□□□ 0.44
MMP13P45452 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.79■□□□□ 0.44
MMP13P45452 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MMP13P45452 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MMP13P45452 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.79■□□□□ 0.44
MMP13P45452 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP13P45452 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP13P45452 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP13P45452 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.78■□□□□ 0.44
MMP13P45452 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 IFNL4P1-201ENST00000607083 540 ntBASIC17.78■□□□□ 0.44
MMP13P45452 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP13P45452 AP005117.1-201ENST00000584346 1413 ntBASIC17.78■□□□□ 0.44
MMP13P45452 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP13P45452 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 AC009336.1-201ENST00000608941 1553 ntBASIC17.78■□□□□ 0.44
MMP13P45452 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP13P45452 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP13P45452 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP13P45452 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP13P45452 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.77■□□□□ 0.44
MMP13P45452 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MMP13P45452 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.77■□□□□ 0.44
MMP13P45452 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
MMP13P45452 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.77■□□□□ 0.44
MMP13P45452 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.77■□□□□ 0.44
MMP13P45452 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.77■□□□□ 0.44
MMP13P45452 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 AC106795.1-205ENST00000512851 1056 ntBASIC17.77■□□□□ 0.44
MMP13P45452 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.77■□□□□ 0.44
MMP13P45452 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP13P45452 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms