Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA4P43681 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA4P43681 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA4P43681 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA4P43681 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA4P43681 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA4P43681 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA4P43681 AP002469.2-201ENST00000531724 424 ntBASIC17.23■□□□□ 0.35
CHRNA4P43681 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CHRNA4P43681 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.23■□□□□ 0.35
CHRNA4P43681 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA4P43681 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA4P43681 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA4P43681 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA4P43681 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.22■□□□□ 0.35
CHRNA4P43681 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA4P43681 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA4P43681 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 KRT18P27-201ENST00000427733 1299 ntBASIC17.22■□□□□ 0.35
CHRNA4P43681 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 FAAHP1-202ENST00000446499 1238 ntBASIC17.22■□□□□ 0.35
CHRNA4P43681 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA4P43681 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CHRNA4P43681 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.22■□□□□ 0.35
CHRNA4P43681 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHRNA4P43681 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA4P43681 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA4P43681 AC078925.2-201ENST00000624013 1973 ntBASIC17.22■□□□□ 0.35
CHRNA4P43681 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA4P43681 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CHRNA4P43681 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA4P43681 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CHRNA4P43681 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 AP002414.3-201ENST00000589352 1468 ntBASIC17.21■□□□□ 0.35
CHRNA4P43681 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA4P43681 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.21■□□□□ 0.35
CHRNA4P43681 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.21■□□□□ 0.35
CHRNA4P43681 AC073621.1-201ENST00000392730 636 ntBASIC17.21■□□□□ 0.35
CHRNA4P43681 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 MRPL3P1-201ENST00000400109 1033 ntBASIC17.21■□□□□ 0.35
CHRNA4P43681 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA4P43681 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 AF186996.4-201ENST00000467186 377 ntBASIC17.21■□□□□ 0.35
CHRNA4P43681 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA4P43681 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CHRNA4P43681 AL160237.2-201ENST00000556165 472 ntBASIC17.21■□□□□ 0.35
CHRNA4P43681 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA4P43681 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms