Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.3■□□□□ 0.36
RPA3P35244 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.3■□□□□ 0.36
RPA3P35244 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.3■□□□□ 0.36
RPA3P35244 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RPA3P35244 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RPA3P35244 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.3■□□□□ 0.36
RPA3P35244 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.3■□□□□ 0.36
RPA3P35244 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.3■□□□□ 0.36
RPA3P35244 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RPA3P35244 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.3■□□□□ 0.36
RPA3P35244 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RPA3P35244 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.3■□□□□ 0.36
RPA3P35244 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RPA3P35244 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.3■□□□□ 0.36
RPA3P35244 AL513523.2-202ENST00000427283 2040 ntBASIC17.3■□□□□ 0.36
RPA3P35244 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
RPA3P35244 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.3■□□□□ 0.36
RPA3P35244 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPA3P35244 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPA3P35244 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 AC010460.3-201ENST00000511359 1579 ntBASIC17.29■□□□□ 0.36
RPA3P35244 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 AP002383.4-201ENST00000442518 975 ntBASIC17.29■□□□□ 0.36
RPA3P35244 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.29■□□□□ 0.36
RPA3P35244 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.29■□□□□ 0.36
RPA3P35244 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 AC092119.3-201ENST00000612618 583 ntBASIC17.29■□□□□ 0.36
RPA3P35244 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 AL596257.1-201ENST00000641463 2694 ntBASIC17.29■□□□□ 0.36
RPA3P35244 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.29■□□□□ 0.36
RPA3P35244 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.29■□□□□ 0.36
RPA3P35244 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPA3P35244 LINC00554-201ENST00000564841 3011 ntBASIC17.29■□□□□ 0.36
RPA3P35244 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.29■□□□□ 0.36
RPA3P35244 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.28■□□□□ 0.36
RPA3P35244 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPA3P35244 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RPA3P35244 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 ATP5G2P1-201ENST00000433580 426 ntBASIC17.28■□□□□ 0.36
RPA3P35244 LINC00265-3P-201ENST00000447588 903 ntBASIC17.28■□□□□ 0.36
RPA3P35244 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPA3P35244 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.28■□□□□ 0.36
RPA3P35244 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RPA3P35244 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
RPA3P35244 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPA3P35244 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms