Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 FRMD8P1-201ENST00000440433 1524 ntBASIC17.18■□□□□ 0.34
LSP1P33241 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.18■□□□□ 0.34
LSP1P33241 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.18■□□□□ 0.34
LSP1P33241 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.18■□□□□ 0.34
LSP1P33241 AC128676.1-201ENST00000454392 318 ntBASIC17.18■□□□□ 0.34
LSP1P33241 AP003041.3-201ENST00000527151 707 ntBASIC17.18■□□□□ 0.34
LSP1P33241 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.18■□□□□ 0.34
LSP1P33241 AF186192.3-201ENST00000583427 947 ntBASIC17.18■□□□□ 0.34
LSP1P33241 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LSP1P33241 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 AC073648.6-201ENST00000641589 218 ntBASIC17.18■□□□□ 0.34
LSP1P33241 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LSP1P33241 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.18■□□□□ 0.34
LSP1P33241 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.17■□□□□ 0.34
LSP1P33241 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.17■□□□□ 0.34
LSP1P33241 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
LSP1P33241 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LSP1P33241 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LSP1P33241 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSP1P33241 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.16■□□□□ 0.34
LSP1P33241 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.16■□□□□ 0.34
LSP1P33241 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.16■□□□□ 0.34
LSP1P33241 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 ABHD17AP1-201ENST00000358206 933 ntBASIC17.16■□□□□ 0.34
LSP1P33241 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.16■□□□□ 0.34
LSP1P33241 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LSP1P33241 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.16■□□□□ 0.34
LSP1P33241 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 TMEM191A-211ENST00000637163 1067 ntBASIC17.16■□□□□ 0.34
LSP1P33241 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LSP1P33241 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.16■□□□□ 0.34
LSP1P33241 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.16■□□□□ 0.34
LSP1P33241 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms