Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.43□□□□□ -0.1
COL8A2P25067 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
COL8A2P25067 AC025580.3-201ENST00000617932 1424 ntBASIC14.42□□□□□ -0.1
COL8A2P25067 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.42□□□□□ -0.1
COL8A2P25067 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.42□□□□□ -0.1
COL8A2P25067 SLC25A6P2-201ENST00000497974 877 ntBASIC14.42□□□□□ -0.1
COL8A2P25067 CXCL1P1-201ENST00000502804 216 ntBASIC14.42□□□□□ -0.1
COL8A2P25067 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.42□□□□□ -0.1
COL8A2P25067 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.42□□□□□ -0.1
COL8A2P25067 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.42□□□□□ -0.1
COL8A2P25067 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.42□□□□□ -0.1
COL8A2P25067 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COL8A2P25067 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL8A2P25067 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
COL8A2P25067 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
COL8A2P25067 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
COL8A2P25067 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.41□□□□□ -0.1
COL8A2P25067 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.41□□□□□ -0.1
COL8A2P25067 KRT19P2-202ENST00000557173 1012 ntBASIC14.41□□□□□ -0.1
COL8A2P25067 AC005829.1-201ENST00000570002 483 ntBASIC14.41□□□□□ -0.1
COL8A2P25067 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.41□□□□□ -0.1
COL8A2P25067 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.41□□□□□ -0.1
COL8A2P25067 AC007064.4-201ENST00000637740 555 ntBASIC14.41□□□□□ -0.1
COL8A2P25067 GNAS-203ENST00000306120 1878 ntBASIC14.41□□□□□ -0.1
COL8A2P25067 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
COL8A2P25067 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
COL8A2P25067 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL8A2P25067 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
COL8A2P25067 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COL8A2P25067 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 OR6D1P-202ENST00000641007 5290 ntBASIC14.4□□□□□ -0.1
COL8A2P25067 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.4□□□□□ -0.1
COL8A2P25067 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.4□□□□□ -0.1
COL8A2P25067 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.4□□□□□ -0.1
COL8A2P25067 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
COL8A2P25067 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
COL8A2P25067 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL8A2P25067 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.4□□□□□ -0.1
COL8A2P25067 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COL8A2P25067 FAM185BP-201ENST00000443595 716 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms