Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP11P24347 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MMP11P24347 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP11P24347 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP11P24347 CRYGEP-201ENST00000412192 528 ntBASIC16.23■□□□□ 0.19
MMP11P24347 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP11P24347 AC004832.2-201ENST00000426397 482 ntBASIC16.23■□□□□ 0.19
MMP11P24347 PRSS29P-201ENST00000440800 595 ntBASIC16.23■□□□□ 0.19
MMP11P24347 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP11P24347 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MMP11P24347 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.23■□□□□ 0.19
MMP11P24347 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.23■□□□□ 0.19
MMP11P24347 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MMP11P24347 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP11P24347 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MMP11P24347 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP11P24347 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MMP11P24347 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP11P24347 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP11P24347 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MMP11P24347 AP002414.1-201ENST00000391405 1147 ntBASIC16.22■□□□□ 0.19
MMP11P24347 YBX2P1-201ENST00000394192 760 ntBASIC16.22■□□□□ 0.19
MMP11P24347 UPF3AP3-201ENST00000420996 769 ntBASIC16.22■□□□□ 0.19
MMP11P24347 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.22■□□□□ 0.19
MMP11P24347 ACTG1P4-201ENST00000425123 1122 ntBASIC16.22■□□□□ 0.19
MMP11P24347 VN2R19P-201ENST00000442399 1052 ntBASIC16.22■□□□□ 0.19
MMP11P24347 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP11P24347 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MMP11P24347 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP11P24347 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 MIR4751-201ENST00000578027 74 ntBASIC16.22■□□□□ 0.19
MMP11P24347 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP11P24347 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
MMP11P24347 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
MMP11P24347 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP11P24347 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP11P24347 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
MMP11P24347 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 MIR3687-2-201ENST00000577708 61 ntBASIC16.21■□□□□ 0.19
MMP11P24347 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP11P24347 MIR3687-1-201ENST00000614492 61 ntBASIC16.21■□□□□ 0.19
MMP11P24347 GGTLC5P-201ENST00000617623 998 ntBASIC16.21■□□□□ 0.19
MMP11P24347 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP11P24347 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP11P24347 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP11P24347 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
MMP11P24347 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP11P24347 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms