Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
XRCC1P18887 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 IL9RP2-201ENST00000423948 1312 ntBASIC17.08■□□□□ 0.32
XRCC1P18887 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
XRCC1P18887 AC003669.1-201ENST00000334569 611 ntBASIC17.08■□□□□ 0.32
XRCC1P18887 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.08■□□□□ 0.32
XRCC1P18887 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.08■□□□□ 0.32
XRCC1P18887 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
XRCC1P18887 BX005266.1-201ENST00000473402 457 ntBASIC17.08■□□□□ 0.32
XRCC1P18887 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
XRCC1P18887 MIR7706-201ENST00000613747 67 ntBASIC17.08■□□□□ 0.32
XRCC1P18887 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
XRCC1P18887 AC107918.4-202ENST00000641623 219 ntBASIC17.08■□□□□ 0.32
XRCC1P18887 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.08■□□□□ 0.32
XRCC1P18887 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.08■□□□□ 0.32
XRCC1P18887 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC1P18887 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.08■□□□□ 0.32
XRCC1P18887 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
XRCC1P18887 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.07■□□□□ 0.32
XRCC1P18887 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.07■□□□□ 0.32
XRCC1P18887 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.07■□□□□ 0.32
XRCC1P18887 AL022342.1-201ENST00000400363 863 ntBASIC17.07■□□□□ 0.32
XRCC1P18887 AC005104.2-201ENST00000427818 678 ntBASIC17.07■□□□□ 0.32
XRCC1P18887 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.07■□□□□ 0.32
XRCC1P18887 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.07■□□□□ 0.32
XRCC1P18887 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.07■□□□□ 0.32
XRCC1P18887 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
XRCC1P18887 AL049840.3-201ENST00000602669 611 ntBASIC17.07■□□□□ 0.32
XRCC1P18887 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 AC120114.3-201ENST00000611923 658 ntBASIC17.07■□□□□ 0.32
XRCC1P18887 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.07■□□□□ 0.32
XRCC1P18887 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
XRCC1P18887 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC1P18887 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC1P18887 HLA-J-201ENST00000462773 1622 ntBASIC17.07■□□□□ 0.32
XRCC1P18887 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
XRCC1P18887 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
XRCC1P18887 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
XRCC1P18887 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 DOC2GP-204ENST00000639052 2548 ntBASIC17.06■□□□□ 0.32
XRCC1P18887 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC1P18887 AC243591.1-201ENST00000452967 1364 ntBASIC17.06■□□□□ 0.32
XRCC1P18887 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC1P18887 FLJ38576-201ENST00000623820 2459 ntBASIC17.06■□□□□ 0.32
XRCC1P18887 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC1P18887 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC1P18887 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 MYCLP1-201ENST00000372451 1075 ntBASIC17.06■□□□□ 0.32
XRCC1P18887 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC1P18887 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC1P18887 KLF4P1-201ENST00000412782 1185 ntBASIC17.06■□□□□ 0.32
XRCC1P18887 AP000347.1-202ENST00000435868 847 ntBASIC17.06■□□□□ 0.32
XRCC1P18887 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC1P18887 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC1P18887 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms