Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFRAP16234 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFRAP16234 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PDGFRAP16234 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFRAP16234 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFRAP16234 AC009053.2-201ENST00000563701 2365 ntBASIC17.94■□□□□ 0.46
PDGFRAP16234 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDGFRAP16234 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PDGFRAP16234 AC005915.1-201ENST00000624912 2018 ntBASIC17.93■□□□□ 0.46
PDGFRAP16234 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDGFRAP16234 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFRAP16234 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFRAP16234 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.93■□□□□ 0.46
PDGFRAP16234 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFRAP16234 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFRAP16234 LAGE3P1-201ENST00000425356 484 ntBASIC17.93■□□□□ 0.46
PDGFRAP16234 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFRAP16234 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFRAP16234 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFRAP16234 OR7E14P-202ENST00000530490 1290 ntBASIC17.93■□□□□ 0.46
PDGFRAP16234 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFRAP16234 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFRAP16234 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFRAP16234 MIR7706-201ENST00000613747 67 ntBASIC17.93■□□□□ 0.46
PDGFRAP16234 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFRAP16234 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PDGFRAP16234 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFRAP16234 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFRAP16234 AC105020.1-201ENST00000435356 2205 ntBASIC17.92■□□□□ 0.46
PDGFRAP16234 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFRAP16234 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFRAP16234 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDGFRAP16234 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.92■□□□□ 0.46
PDGFRAP16234 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFRAP16234 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.92■□□□□ 0.46
PDGFRAP16234 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFRAP16234 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
PDGFRAP16234 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.92■□□□□ 0.46
PDGFRAP16234 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFRAP16234 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFRAP16234 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PDGFRAP16234 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFRAP16234 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFRAP16234 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFRAP16234 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PDGFRAP16234 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.92■□□□□ 0.46
PDGFRAP16234 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFRAP16234 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFRAP16234 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 AC106886.4-201ENST00000623557 2502 ntBASIC17.91■□□□□ 0.46
PDGFRAP16234 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFRAP16234 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFRAP16234 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFRAP16234 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDGFRAP16234 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms