Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.9■□□□□ 0.3
COL6A2P12110 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
COL6A2P12110 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.9■□□□□ 0.3
COL6A2P12110 MINOS1P3-201ENST00000457048 203 ntBASIC16.9■□□□□ 0.3
COL6A2P12110 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.9■□□□□ 0.3
COL6A2P12110 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
COL6A2P12110 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.9■□□□□ 0.3
COL6A2P12110 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL6A2P12110 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 KRT18P1-202ENST00000452408 1331 ntBASIC16.9■□□□□ 0.3
COL6A2P12110 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.9■□□□□ 0.3
COL6A2P12110 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 AL021920.2-201ENST00000624828 1351 ntBASIC16.89■□□□□ 0.3
COL6A2P12110 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL6A2P12110 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.89■□□□□ 0.3
COL6A2P12110 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL6A2P12110 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.89■□□□□ 0.3
COL6A2P12110 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.89■□□□□ 0.29
COL6A2P12110 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
COL6A2P12110 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COL6A2P12110 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.89■□□□□ 0.29
COL6A2P12110 NUS1P1-201ENST00000446295 882 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 TSSC2-201ENST00000450217 709 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 KRT17P6-201ENST00000453795 1220 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
COL6A2P12110 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 FAM86EP-206ENST00000510506 987 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.89■□□□□ 0.29
COL6A2P12110 DUX4L17-201ENST00000557360 1267 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 BNIP3P18-201ENST00000593976 575 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 AC116407.4-201ENST00000623319 1061 ntBASIC16.89■□□□□ 0.29
COL6A2P12110 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
COL6A2P12110 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.89■□□□□ 0.29
COL6A2P12110 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.89■□□□□ 0.29
COL6A2P12110 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.89■□□□□ 0.29
COL6A2P12110 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.89■□□□□ 0.29
COL6A2P12110 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COL6A2P12110 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COL6A2P12110 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL6A2P12110 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 SIGLEC16-201ENST00000599858 1437 ntBASIC16.88■□□□□ 0.29
COL6A2P12110 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL6A2P12110 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL6A2P12110 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
COL6A2P12110 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COL6A2P12110 RCN1P2-201ENST00000398357 915 ntBASIC16.88■□□□□ 0.29
COL6A2P12110 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 SPDYE21P-201ENST00000413323 827 ntBASIC16.88■□□□□ 0.29
COL6A2P12110 POM121L3P-201ENST00000419331 1163 ntBASIC16.88■□□□□ 0.29
COL6A2P12110 TPSP2-201ENST00000561760 610 ntBASIC16.88■□□□□ 0.29
COL6A2P12110 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.88■□□□□ 0.29
COL6A2P12110 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.88■□□□□ 0.29
COL6A2P12110 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.88■□□□□ 0.29
COL6A2P12110 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL6A2P12110 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL6A2P12110 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL6A2P12110 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.88■□□□□ 0.29
COL6A2P12110 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL6A2P12110 AL391256.1-201ENST00000443260 1855 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms