Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
COL5A2P05997 RASL12-203ENST00000434605 982 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC22.15■■□□□ 1.14
COL5A2P05997 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 AL079307.3-201ENST00000556114 283 ntBASIC22.15■■□□□ 1.14
COL5A2P05997 ARL16-202ENST00000570561 768 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 AC105021.1-202ENST00000570572 669 ntBASIC22.15■■□□□ 1.14
COL5A2P05997 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 AL162274.1-201ENST00000617191 1098 ntBASIC22.15■■□□□ 1.14
COL5A2P05997 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC22.15■■□□□ 1.14
COL5A2P05997 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.15■■□□□ 1.14
COL5A2P05997 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.15■■□□□ 1.14
COL5A2P05997 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
COL5A2P05997 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
COL5A2P05997 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
COL5A2P05997 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.15■■□□□ 1.14
COL5A2P05997 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 AL391825.1-201ENST00000457671 1364 ntBASIC22.15■■□□□ 1.14
COL5A2P05997 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.15■■□□□ 1.14
COL5A2P05997 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC22.15■■□□□ 1.14
COL5A2P05997 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC22.15■■□□□ 1.14
COL5A2P05997 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL5A2P05997 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
COL5A2P05997 PKD1P6-201ENST00000343738 4769 ntBASIC22.14■■□□□ 1.14
COL5A2P05997 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL5A2P05997 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL5A2P05997 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL5A2P05997 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL5A2P05997 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.14■■□□□ 1.13
COL5A2P05997 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.14■■□□□ 1.13
COL5A2P05997 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.14■■□□□ 1.13
COL5A2P05997 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.14■■□□□ 1.13
COL5A2P05997 AC008494.3-201ENST00000606615 944 ntBASIC22.14■■□□□ 1.13
COL5A2P05997 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL5A2P05997 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL5A2P05997 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL5A2P05997 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.13■■□□□ 1.13
COL5A2P05997 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.13■■□□□ 1.13
COL5A2P05997 AC093525.9-201ENST00000624961 1746 ntBASIC22.13■■□□□ 1.13
COL5A2P05997 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 AC104581.1-202ENST00000635932 2618 ntBASIC22.13■■□□□ 1.13
COL5A2P05997 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
COL5A2P05997 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 RPS2P32-201ENST00000439199 892 ntBASIC22.13■■□□□ 1.13
COL5A2P05997 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC22.13■■□□□ 1.13
COL5A2P05997 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.13■■□□□ 1.13
COL5A2P05997 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC22.13■■□□□ 1.13
COL5A2P05997 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC22.13■■□□□ 1.13
COL5A2P05997 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.13■■□□□ 1.13
COL5A2P05997 AC007431.3-201ENST00000623221 587 ntBASIC22.13■■□□□ 1.13
COL5A2P05997 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.13■■□□□ 1.13
COL5A2P05997 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.13■■□□□ 1.13
COL5A2P05997 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.13■■□□□ 1.13
COL5A2P05997 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.13■■□□□ 1.13
COL5A2P05997 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL5A2P05997 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.12■■□□□ 1.13
COL5A2P05997 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC22.12■■□□□ 1.13
COL5A2P05997 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL5A2P05997 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC22.12■■□□□ 1.13
COL5A2P05997 MXI1-205ENST00000393134 889 ntTSL 2 BASIC22.12■■□□□ 1.13
COL5A2P05997 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 AC112492.5-201ENST00000421897 457 ntBASIC22.12■■□□□ 1.13
COL5A2P05997 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC22.12■■□□□ 1.13
COL5A2P05997 AC106886.1-201ENST00000568660 600 ntBASIC22.12■■□□□ 1.13
COL5A2P05997 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.12■■□□□ 1.13
COL5A2P05997 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL5A2P05997 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms