Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 AC064836.3-201ENST00000607928 673 ntBASIC17.28■□□□□ 0.36
PRAMEF11O60813 AC027601.4-201ENST00000611259 610 ntBASIC17.28■□□□□ 0.36
PRAMEF11O60813 ACTL9-202ENST00000612068 1252 ntBASIC17.28■□□□□ 0.36
PRAMEF11O60813 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF11O60813 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF11O60813 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF11O60813 PCDHB17P-201ENST00000539533 2393 ntBASIC17.27■□□□□ 0.36
PRAMEF11O60813 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 AC007967.2-201ENST00000432613 625 ntBASIC17.27■□□□□ 0.36
PRAMEF11O60813 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 CXCL1P1-201ENST00000502804 216 ntBASIC17.27■□□□□ 0.36
PRAMEF11O60813 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF11O60813 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF11O60813 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF11O60813 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF11O60813 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF11O60813 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF11O60813 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF11O60813 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF11O60813 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEF11O60813 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 MIR574-201ENST00000385209 96 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 AL591424.1-201ENST00000442569 1213 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 AC091167.2-201ENST00000579581 588 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 AC140113.2-201ENST00000604370 208 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 AC105020.1-201ENST00000435356 2205 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 AC022211.2-201ENST00000585075 2527 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 AC005915.1-201ENST00000624912 2018 ntBASIC17.26■□□□□ 0.35
PRAMEF11O60813 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF11O60813 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF11O60813 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms