Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 SPDYE8P-202ENST00000612377 668 ntBASIC16.31■□□□□ 0.2
DUX1O43812 AC106028.4-201ENST00000614509 607 ntBASIC16.31■□□□□ 0.2
DUX1O43812 AL161645.1-201ENST00000622716 1255 ntBASIC16.31■□□□□ 0.2
DUX1O43812 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX1O43812 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX1O43812 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX1O43812 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX1O43812 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX1O43812 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
DUX1O43812 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
DUX1O43812 HMGA1P7-201ENST00000406908 502 ntBASIC16.3■□□□□ 0.2
DUX1O43812 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.3■□□□□ 0.2
DUX1O43812 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX1O43812 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DUX1O43812 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX1O43812 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.3■□□□□ 0.2
DUX1O43812 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.3■□□□□ 0.2
DUX1O43812 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.3■□□□□ 0.2
DUX1O43812 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DUX1O43812 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.3■□□□□ 0.2
DUX1O43812 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX1O43812 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX1O43812 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DUX1O43812 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
DUX1O43812 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX1O43812 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DUX1O43812 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX1O43812 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DUX1O43812 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX1O43812 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX1O43812 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX1O43812 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
DUX1O43812 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.29■□□□□ 0.2
DUX1O43812 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX1O43812 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
DUX1O43812 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX1O43812 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX1O43812 AC004449.1-201ENST00000564240 433 ntBASIC16.29■□□□□ 0.2
DUX1O43812 RARRES2P8-201ENST00000566335 367 ntBASIC16.29■□□□□ 0.2
DUX1O43812 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 AP001350.2-201ENST00000625104 1094 ntBASIC16.29■□□□□ 0.2
DUX1O43812 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX1O43812 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX1O43812 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
DUX1O43812 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX1O43812 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DUX1O43812 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 AL021920.2-201ENST00000624828 1351 ntBASIC16.28■□□□□ 0.2
DUX1O43812 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX1O43812 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX1O43812 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 AC116353.5-201ENST00000638148 1699 ntBASIC16.28■□□□□ 0.2
DUX1O43812 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.28■□□□□ 0.2
DUX1O43812 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 AC093028.1-201ENST00000622998 982 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms