Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.83□□□□□ -0.04
PHF1O43189 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.83□□□□□ -0.04
PHF1O43189 AC125634.1-201ENST00000438758 1403 ntBASIC14.83□□□□□ -0.04
PHF1O43189 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHF1O43189 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 RPSAP43-201ENST00000402237 625 ntBASIC14.82□□□□□ -0.04
PHF1O43189 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 MED15P5-201ENST00000423150 992 ntBASIC14.82□□□□□ -0.04
PHF1O43189 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 GPX1P2-201ENST00000429271 606 ntBASIC14.82□□□□□ -0.04
PHF1O43189 AC004967.1-201ENST00000453589 447 ntBASIC14.82□□□□□ -0.04
PHF1O43189 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 AC009533.2-201ENST00000543664 586 ntBASIC14.82□□□□□ -0.04
PHF1O43189 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.82□□□□□ -0.04
PHF1O43189 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.82□□□□□ -0.04
PHF1O43189 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.82□□□□□ -0.04
PHF1O43189 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.82□□□□□ -0.04
PHF1O43189 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHF1O43189 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
PHF1O43189 AC100803.2-201ENST00000562459 1963 ntBASIC14.82□□□□□ -0.04
PHF1O43189 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PHF1O43189 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHF1O43189 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PHF1O43189 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 RPS2P28-201ENST00000314255 741 ntBASIC14.81□□□□□ -0.04
PHF1O43189 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.81□□□□□ -0.04
PHF1O43189 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 SCARNA2-201ENST00000458748 420 ntBASIC14.81□□□□□ -0.04
PHF1O43189 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.81□□□□□ -0.04
PHF1O43189 MIR3197-201ENST00000582241 73 ntBASIC14.81□□□□□ -0.04
PHF1O43189 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 AL356488.2-201ENST00000602755 427 ntBASIC14.81□□□□□ -0.04
PHF1O43189 AC116407.3-201ENST00000623905 1129 ntBASIC14.81□□□□□ -0.04
PHF1O43189 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHF1O43189 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PHF1O43189 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PHF1O43189 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms