Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.22■□□□□ 0.51
O00370 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
O00370 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.22■□□□□ 0.51
O00370 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 FDX1P1-201ENST00000449115 551 ntBASIC18.22■□□□□ 0.51
O00370 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.22■□□□□ 0.51
O00370 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
O00370 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.22■□□□□ 0.51
O00370 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
O00370 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
O00370 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
O00370 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
O00370 AC018695.7-201ENST00000624587 2492 ntBASIC18.22■□□□□ 0.51
O00370 HLA-A-201ENST00000376802 1334 ntBASIC18.22■□□□□ 0.51
O00370 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
O00370 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 AP002414.3-201ENST00000589352 1468 ntBASIC18.21■□□□□ 0.51
O00370 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.21■□□□□ 0.51
O00370 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
O00370 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.21■□□□□ 0.51
O00370 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.21■□□□□ 0.51
O00370 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.21■□□□□ 0.51
O00370 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.21■□□□□ 0.51
O00370 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.21■□□□□ 0.51
O00370 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.21■□□□□ 0.51
O00370 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.21■□□□□ 0.51
O00370 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.21■□□□□ 0.51
O00370 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.21■□□□□ 0.51
O00370 AC105339.3-201ENST00000560043 636 ntBASIC18.21■□□□□ 0.51
O00370 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.21■□□□□ 0.51
O00370 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
O00370 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
O00370 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.21■□□□□ 0.51
O00370 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
O00370 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.21■□□□□ 0.51
O00370 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
O00370 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
O00370 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
O00370 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 AGGF1P2-201ENST00000426656 2106 ntBASIC18.2■□□□□ 0.5
O00370 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
O00370 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
O00370 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
O00370 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
O00370 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.2■□□□□ 0.5
O00370 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 RPS2P28-201ENST00000314255 741 ntBASIC18.2■□□□□ 0.5
O00370 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
O00370 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.2■□□□□ 0.5
O00370 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.2■□□□□ 0.5
O00370 PTCHD3P3-201ENST00000403073 906 ntBASIC18.2■□□□□ 0.5
O00370 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 AC136632.2-201ENST00000512891 861 ntBASIC18.2■□□□□ 0.5
O00370 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
O00370 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.2■□□□□ 0.5
O00370 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.2■□□□□ 0.5
O00370 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
O00370 AP001005.1-201ENST00000571755 1248 ntBASIC18.2■□□□□ 0.5
O00370 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
O00370 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
O00370 AL805961.1-202ENST00000641562 540 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms