Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AP3B1O00203 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3B1O00203 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3B1O00203 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
AP3B1O00203 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
AP3B1O00203 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3B1O00203 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
AP3B1O00203 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
AP3B1O00203 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.27■□□□□ 0.36
AP3B1O00203 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
AP3B1O00203 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3B1O00203 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
AP3B1O00203 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.36
AP3B1O00203 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.27■□□□□ 0.36
AP3B1O00203 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.27■□□□□ 0.36
AP3B1O00203 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.27■□□□□ 0.36
AP3B1O00203 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.27■□□□□ 0.36
AP3B1O00203 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.27■□□□□ 0.36
AP3B1O00203 AL353135.1-201ENST00000606729 504 ntBASIC17.27■□□□□ 0.36
AP3B1O00203 AC093458.2-201ENST00000623150 629 ntBASIC17.27■□□□□ 0.36
AP3B1O00203 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP3B1O00203 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
AP3B1O00203 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.27■□□□□ 0.35
AP3B1O00203 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3B1O00203 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
AP3B1O00203 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
AP3B1O00203 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP3B1O00203 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
AP3B1O00203 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
AP3B1O00203 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3B1O00203 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3B1O00203 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3B1O00203 MIR3652-201ENST00000579335 131 ntBASIC17.26■□□□□ 0.35
AP3B1O00203 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3B1O00203 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3B1O00203 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3B1O00203 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 AP001269.4-201ENST00000609611 512 ntBASIC17.26■□□□□ 0.35
AP3B1O00203 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3B1O00203 AL589182.2-201ENST00000619332 1049 ntBASIC17.26■□□□□ 0.35
AP3B1O00203 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3B1O00203 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
AP3B1O00203 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3B1O00203 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3B1O00203 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.25■□□□□ 0.35
AP3B1O00203 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 AC008894.3-201ENST00000624324 3103 ntBASIC17.25■□□□□ 0.35
AP3B1O00203 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.25■□□□□ 0.35
AP3B1O00203 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
AP3B1O00203 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3B1O00203 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
AP3B1O00203 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3B1O00203 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3B1O00203 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3B1O00203 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3B1O00203 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms