Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX39AO00148 GPX1P2-201ENST00000429271 606 ntBASIC19.19■□□□□ 0.66
DDX39AO00148 AL513480.1-201ENST00000451731 511 ntBASIC19.19■□□□□ 0.66
DDX39AO00148 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX39AO00148 KRT19P2-202ENST00000557173 1012 ntBASIC19.19■□□□□ 0.66
DDX39AO00148 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX39AO00148 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX39AO00148 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX39AO00148 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 ACTL9-202ENST00000612068 1252 ntBASIC19.19■□□□□ 0.66
DDX39AO00148 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX39AO00148 AC055717.3-201ENST00000622967 595 ntBASIC19.19■□□□□ 0.66
DDX39AO00148 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX39AO00148 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX39AO00148 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DDX39AO00148 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.18■□□□□ 0.66
DDX39AO00148 RHOQP3-201ENST00000437982 621 ntBASIC19.18■□□□□ 0.66
DDX39AO00148 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.18■□□□□ 0.66
DDX39AO00148 AC112482.1-201ENST00000492080 688 ntBASIC19.18■□□□□ 0.66
DDX39AO00148 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 AC107918.2-201ENST00000530817 355 ntBASIC19.18■□□□□ 0.66
DDX39AO00148 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
DDX39AO00148 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.18■□□□□ 0.66
DDX39AO00148 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX39AO00148 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX39AO00148 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
DDX39AO00148 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX39AO00148 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX39AO00148 AC092053.1-201ENST00000605787 1936 ntBASIC19.17■□□□□ 0.66
DDX39AO00148 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX39AO00148 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX39AO00148 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX39AO00148 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DDX39AO00148 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.17■□□□□ 0.66
DDX39AO00148 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX39AO00148 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.17■□□□□ 0.66
DDX39AO00148 FAM185BP-201ENST00000443595 716 ntBASIC19.17■□□□□ 0.66
DDX39AO00148 ALG1L5P-201ENST00000482043 771 ntBASIC19.17■□□□□ 0.66
DDX39AO00148 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.17■□□□□ 0.66
DDX39AO00148 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 AC023141.13-201ENST00000604991 943 ntBASIC19.17■□□□□ 0.66
DDX39AO00148 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.17■□□□□ 0.66
DDX39AO00148 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DDX39AO00148 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX39AO00148 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX39AO00148 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX39AO00148 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX39AO00148 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX39AO00148 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX39AO00148 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms