Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LAMB4A4D0S4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.28■■□□□ 1
LAMB4A4D0S4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.28■■□□□ 1
LAMB4A4D0S4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.28■■□□□ 1
LAMB4A4D0S4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.28■■□□□ 1
LAMB4A4D0S4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LAMB4A4D0S4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.28■■□□□ 1
LAMB4A4D0S4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LAMB4A4D0S4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.27■■□□□ 1
LAMB4A4D0S4 AL080243.2-201ENST00000418783 582 ntBASIC21.27■■□□□ 1
LAMB4A4D0S4 AC055876.3-201ENST00000431496 288 ntBASIC21.27■■□□□ 1
LAMB4A4D0S4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.27■■□□□ 1
LAMB4A4D0S4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.27■■□□□ 1
LAMB4A4D0S4 RARRES2P9-201ENST00000565168 469 ntBASIC21.27■■□□□ 1
LAMB4A4D0S4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.27■■□□□ 1
LAMB4A4D0S4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.27■■□□□ 1
LAMB4A4D0S4 AC138649.4-201ENST00000612222 287 ntBASIC21.27■■□□□ 1
LAMB4A4D0S4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.27■■□□□ 1
LAMB4A4D0S4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LAMB4A4D0S4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LAMB4A4D0S4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LAMB4A4D0S4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LAMB4A4D0S4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LAMB4A4D0S4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.27■□□□□ 0.99
LAMB4A4D0S4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
LAMB4A4D0S4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.26■□□□□ 0.99
LAMB4A4D0S4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 TSSK5P-201ENST00000423978 907 ntBASIC21.26■□□□□ 0.99
LAMB4A4D0S4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 AC060834.1-201ENST00000443027 2032 ntBASIC21.26■□□□□ 0.99
LAMB4A4D0S4 AC100757.3-201ENST00000622361 1406 ntBASIC21.26■□□□□ 0.99
LAMB4A4D0S4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LAMB4A4D0S4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 HLA-H-201ENST00000383620 1096 ntBASIC21.25■□□□□ 0.99
LAMB4A4D0S4 AC236430.1-201ENST00000402231 743 ntBASIC21.25■□□□□ 0.99
LAMB4A4D0S4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LAMB4A4D0S4 AL671710.1-201ENST00000610245 2349 ntBASIC21.25■□□□□ 0.99
LAMB4A4D0S4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LAMB4A4D0S4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LAMB4A4D0S4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LAMB4A4D0S4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms