Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 SLC25A1P3-201ENST00000395415 828 ntBASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AC140658.5-201ENST00000438532 169 ntBASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AP000344.2-201ENST00000512987 629 ntBASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV5A0A0B4J1U4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 AC012569.1-201ENST00000591191 1524 ntBASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 AL353732.1-201ENST00000569618 1459 ntBASIC15.27■□□□□ 0.03
TRGV5A0A0B4J1U4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 METTL21AP1-201ENST00000438852 635 ntBASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRGV5A0A0B4J1U4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 TOP3BP1-201ENST00000420768 1380 ntBASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 AC004835.2-201ENST00000603762 682 ntBASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms