Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 AC012313.1-201ENST00000593393 3059 ntBASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 AC112482.1-201ENST00000492080 688 ntBASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAI2Q9Y5P3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms