Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TUBB8P7-204ENST00000567960 1332 ntBASIC23.22■■□□□ 1.31
NINLQ9Y2I6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NINLQ9Y2I6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.22■■□□□ 1.31
NINLQ9Y2I6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 AIRN-201ENST00000601203 4374 ntBASIC23.21■■□□□ 1.31
NINLQ9Y2I6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 KRT8P48-201ENST00000515599 1220 ntBASIC23.21■■□□□ 1.31
NINLQ9Y2I6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC23.21■■□□□ 1.31
NINLQ9Y2I6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
NINLQ9Y2I6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 SPDYE11-202ENST00000450699 704 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 TIMM8BP1-201ENST00000452384 211 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 SPDYE9P-201ENST00000570642 692 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 SPDYE10P-202ENST00000612005 668 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 SPDYE8P-202ENST00000612377 668 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 AF228730.6-201ENST00000641497 218 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 AC084121.3-201ENST00000641716 218 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 AC105233.6-201ENST00000642093 218 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 AC020916.1-201ENST00000587762 1774 ntBASIC23.2■■□□□ 1.3
NINLQ9Y2I6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC23.2■■□□□ 1.3
NINLQ9Y2I6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 TFAMP1-201ENST00000412727 736 ntBASIC23.19■■□□□ 1.3
NINLQ9Y2I6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 AC093520.2-201ENST00000561830 333 ntBASIC23.19■■□□□ 1.3
NINLQ9Y2I6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC23.19■■□□□ 1.3
NINLQ9Y2I6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NINLQ9Y2I6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AL139400.1-201ENST00000366220 510 ntBASIC23.18■■□□□ 1.3
NINLQ9Y2I6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 HLA-V-201ENST00000429037 534 ntBASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AL671277.1-201ENST00000429656 993 ntBASIC23.18■■□□□ 1.3
NINLQ9Y2I6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AC015911.4-201ENST00000588022 1070 ntBASIC23.18■■□□□ 1.3
NINLQ9Y2I6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 WASH6P-202ENST00000359512 1437 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms