Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.91■□□□□ 0.3
NCDNQ9UBB6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 ALG1L8P-201ENST00000533887 760 ntBASIC16.91■□□□□ 0.3
NCDNQ9UBB6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 BICD1-207ENST00000551848 1962 ntBASIC16.91■□□□□ 0.3
NCDNQ9UBB6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AC022144.1-201ENST00000602255 1580 ntBASIC16.9■□□□□ 0.3
NCDNQ9UBB6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AC100757.3-201ENST00000622361 1406 ntBASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 GIMAP3P-201ENST00000495150 836 ntBASIC16.9■□□□□ 0.3
NCDNQ9UBB6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AC010336.2-201ENST00000564226 506 ntBASIC16.9■□□□□ 0.3
NCDNQ9UBB6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 GNAS-203ENST00000306120 1878 ntBASIC16.9■□□□□ 0.3
NCDNQ9UBB6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCDNQ9UBB6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NCDNQ9UBB6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NCDNQ9UBB6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.89■□□□□ 0.3
NCDNQ9UBB6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 AC138969.3-201ENST00000546612 1459 ntBASIC16.89■□□□□ 0.29
NCDNQ9UBB6 AC138932.2-201ENST00000548268 1459 ntBASIC16.89■□□□□ 0.29
NCDNQ9UBB6 AC126755.4-201ENST00000549796 1459 ntBASIC16.89■□□□□ 0.29
NCDNQ9UBB6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 AC087163.2-201ENST00000457299 853 ntBASIC16.89■□□□□ 0.29
NCDNQ9UBB6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.89■□□□□ 0.29
NCDNQ9UBB6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms