Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 AC092068.3-201ENST00000587894 2016 ntBASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 AC073592.4-201ENST00000623827 446 ntBASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 AC148477.5-201ENST00000625164 1645 ntBASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 AGGF1P2-201ENST00000426656 2106 ntBASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 ABCD1P5-201ENST00000445663 754 ntBASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 NUS1P1-201ENST00000446295 882 ntBASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 AP002490.2-201ENST00000524791 560 ntBASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.17■□□□□ 0.18
NEUROD4Q9HD90 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 NUS1P2-201ENST00000417358 873 ntBASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 TUBB8P12-201ENST00000308911 1335 ntBASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms