Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 AC046158.3-201ENST00000624947 2558 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 AC008741.2-201ENST00000612792 3115 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 SIGLEC30P-201ENST00000455569 941 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 AL049597.2-201ENST00000565575 961 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 MIR3180-1-201ENST00000580374 94 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 MIR3180-3-201ENST00000584616 94 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 AC114341.1-201ENST00000618070 349 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBB1Q9H4B7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 AC097637.2-201ENST00000624096 1997 ntBASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBB1Q9H4B7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 AP002414.1-201ENST00000391405 1147 ntBASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.46■□□□□ 0.23
TUBB1Q9H4B7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms