Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 AC025580.3-201ENST00000617932 1424 ntBASIC13.92□□□□□ -0.18
ZNF48Q96MX3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CNN2P11-201ENST00000429351 262 ntBASIC13.92□□□□□ -0.18
ZNF48Q96MX3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 LINC00304-203ENST00000565008 1864 ntBASIC13.92□□□□□ -0.18
ZNF48Q96MX3 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF48Q96MX3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 ACTG1P4-201ENST00000425123 1122 ntBASIC13.91□□□□□ -0.18
ZNF48Q96MX3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF48Q96MX3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AL355312.1-201ENST00000407115 2176 ntBASIC13.9□□□□□ -0.18
ZNF48Q96MX3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms