Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 KRT18P13-201ENST00000400056 1290 ntBASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 AL513480.1-201ENST00000451731 511 ntBASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 KRT19P2-202ENST00000557173 1012 ntBASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 AC005412.3-201ENST00000580309 715 ntBASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 AC092865.6-201ENST00000642101 219 ntBASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 TOP3BP1-201ENST00000420768 1380 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 FZD10-202ENST00000539839 3282 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 YBX2P1-201ENST00000394192 760 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 DNAJB3-201ENST00000446806 729 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 PDPK2P-202ENST00000562415 1191 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 AL513190.1-201ENST00000621254 727 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 AL645608.8-201ENST00000606034 2086 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 AC092053.1-201ENST00000605787 1936 ntBASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCD1Q96GM5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 AC025580.3-201ENST00000617932 1424 ntBASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms