Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF183Q96D59 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RNF183Q96D59 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 MYCLP1-201ENST00000372451 1075 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.74□□□□□ -0.37
RNF183Q96D59 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RNF183Q96D59 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.74□□□□□ -0.37
RNF183Q96D59 SIGLEC30P-201ENST00000455569 941 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 AC092910.1-201ENST00000482027 1129 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 AC002558.1-201ENST00000488906 803 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.74□□□□□ -0.37
RNF183Q96D59 KRT18P58-201ENST00000527480 1120 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 SLC25A1P1-201ENST00000528351 927 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.74□□□□□ -0.37
RNF183Q96D59 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF183Q96D59 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 AC138028.4-201ENST00000564984 1845 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 AC132938.5-201ENST00000624980 1813 ntBASIC12.74□□□□□ -0.37
RNF183Q96D59 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
RNF183Q96D59 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RNF183Q96D59 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF183Q96D59 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF183Q96D59 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 AC012317.2-201ENST00000623305 2251 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RNF183Q96D59 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF183Q96D59 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.73□□□□□ -0.37
RNF183Q96D59 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF183Q96D59 MIR574-201ENST00000385209 96 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RNF183Q96D59 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.73□□□□□ -0.37
RNF183Q96D59 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RNF183Q96D59 IGHV3-22-201ENST00000520721 359 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF183Q96D59 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.73□□□□□ -0.37
RNF183Q96D59 AC012640.2-201ENST00000561606 901 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.73□□□□□ -0.37
RNF183Q96D59 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.73□□□□□ -0.37
RNF183Q96D59 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
RNF183Q96D59 AL589182.2-201ENST00000619332 1049 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 MIR1199-201ENST00000621445 119 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 AC117500.6-201ENST00000624871 588 ntBASIC12.73□□□□□ -0.37
RNF183Q96D59 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
RNF183Q96D59 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms