Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTHRC1Q96CG8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTHRC1Q96CG8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTHRC1Q96CG8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTHRC1Q96CG8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.82■□□□□ 0.12
CTHRC1Q96CG8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CTHRC1Q96CG8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 AC129492.6-201ENST00000611383 1305 ntBASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 NKILA-202ENST00000614771 2598 ntBASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 AC004790.2-201ENST00000623588 572 ntBASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.81■□□□□ 0.12
CTHRC1Q96CG8 RNF216P1-203ENST00000404404 2427 ntBASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 MRPL20P1-201ENST00000400819 433 ntBASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 AC009947.1-201ENST00000444350 727 ntBASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 RNA5SP415-201ENST00000517246 115 ntBASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 AC013467.2-201ENST00000605472 835 ntBASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTHRC1Q96CG8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AC011676.5-201ENST00000624864 2660 ntBASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AC108751.1-201ENST00000490852 363 ntBASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AC145285.3-201ENST00000564603 959 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms