Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDND2Q8NHS1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDND2Q8NHS1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDND2Q8NHS1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDND2Q8NHS1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDND2Q8NHS1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MIR1233-2-201ENST00000408138 82 ntBASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MIR1233-1-201ENST00000408722 82 ntBASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AC007967.2-201ENST00000432613 625 ntBASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 SIGLEC30P-201ENST00000455569 941 ntBASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CLDND2Q8NHS1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDND2Q8NHS1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDND2Q8NHS1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDND2Q8NHS1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDND2Q8NHS1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDND2Q8NHS1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CLDND2Q8NHS1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 STK19B-204ENST00000512515 211 ntBASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 RNA5SP416-201ENST00000516838 111 ntBASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 IGHV3-52-201ENST00000519770 353 ntBASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 AC004706.3-202ENST00000621574 984 ntBASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 NCF1C-201ENST00000438382 1427 ntBASIC14.58□□□□□ -0.08
CLDND2Q8NHS1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CLDND2Q8NHS1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDND2Q8NHS1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms